I would like to have pure sounding woodwind chords using GPO and Finale. GPO uses Equal Temperament for its intonation. However, when playing chords woodwind players tune the notes in such a way as to eliminate beats. For example, a player playing the 3rd of a major chord needs to drop the pitch by 13.7 cents in order to make a pure interval - this is called Just intonation.

I have successfully produced pure chords, but it means leaving a space between them so I can manually adjust the intonation for each instrument.

Is there are a way in Finale or GPO to make on-the-fly software adjustments so it will occur during recording?