I took David Sosnowski's (etLux) advice and pursued the original flow of the music.
The first section is unchanged and now the music stays dark until the last part which is now pretty much a choral resolution of the theme and it's ending.
The second section is repeated with a bridge that has a connection to the first section but is also an interruption. It may be more noise than music or an effect. You might find it even a little humorous in a dark sense.
The Darkness (Take 2)